STRINGSTRING
Noca_4615 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4615" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4615Hypothetical protein (127 aa)    
Predicted Functional Partners:
Noca_4617
Cellulase (341 aa)
              0.859
Noca_4616
Hypothetical protein (204 aa)
              0.859
Noca_4618
Major facilitator transporter (426 aa)
              0.845
Noca_4614
Sigma-70 region 2 domain-containing protein (413 aa)
              0.564
Noca_3035
Hypothetical protein (210 aa)
   
          0.545
Noca_2350
Hypothetical protein (65 aa)
   
          0.518
Noca_1767
FAD linked oxidase domain-containing protein (484 aa)
   
   
    0.517
Noca_3946
Hypothetical protein (175 aa)
   
          0.489
Noca_1196
Hypothetical protein (174 aa)
   
          0.454
Noca_4613
Thimet oligopeptidase (641 aa)
              0.446
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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