STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4619KEGG: mpa:MAP3942 hypothetical protein. (168 aa)    
Predicted Functional Partners:
mca
LmbE family protein; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
   
 0.640
Noca_2107
PFAM: protein of unknown function DUF664; KEGG: sco:SCO2990 hypothetical protein.
  
   
 0.579
Noca_3621
KEGG: rha:RHA1_ro02139 hypothetical protein.
  
     0.561
Noca_4620
PFAM: RelA/SpoT domain protein; KEGG: rha:RHA1_ro05719 cytochrome P450 CYP130.
       0.531
Noca_1383
KEGG: mmc:Mmcs_3603 DsbA oxidoreductase.
 
     0.503
Noca_2627
KEGG: nfa:nfa29330 hypothetical protein.
  
     0.490
Noca_0953
PFAM: von Willebrand factor, type A; KEGG: rha:RHA1_ro05590 hypothetical protein.
  
     0.466
Noca_1196
PFAM: protein of unknown function DUF664; KEGG: sma:SAV7047 hypothetical protein.
  
   
 0.436
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.