STRINGSTRING
Noca_4619 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4619" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4619Hypothetical protein (168 aa)    
Predicted Functional Partners:
Noca_4620
RelA/SpoT domain-containing protein (1046 aa)
              0.595
Noca_3964
Hypothetical protein (322 aa)
   
          0.587
Noca_3628
Hypothetical protein (151 aa)
   
          0.567
Noca_1789
Secreted protein (248 aa)
   
          0.494
Noca_2691
Hypothetical protein (66 aa)
   
          0.453
Noca_0932
Hypothetical protein (133 aa)
   
          0.427
Noca_4407
SSS family solute/sodium (Na+) symporter (613 aa)
   
          0.419
Noca_4406
Hypothetical protein (92 aa)
   
          0.405
Noca_3920
Transcription activator, effector binding (161 aa)
   
          0.401
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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