STRINGSTRING
Noca_4637 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4637" - N-acetyltransferase GCN5 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4637N-acetyltransferase GCN5 (193 aa)    
Predicted Functional Partners:
Noca_3559
N-acetyltransferase GCN5 (218 aa)
   
          0.739
Noca_4636
Hypothetical protein (287 aa)
              0.651
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (202 aa)
   
      0.642
Noca_4220
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
   
 
  0.627
Noca_4210
DegT/DnrJ/EryC1/StrS aminotransferase (362 aa)
   
 
  0.627
Noca_1028
DegT/DnrJ/EryC1/StrS aminotransferase (269 aa)
   
 
  0.627
Noca_0794
N-acetyltransferase GCN5 (197 aa)
 
          0.560
Noca_4635
ROK family protein (401 aa)
   
        0.500
Noca_4634
Binding-protein-dependent transport systems inner membrane component (292 aa)
   
        0.500
Noca_4633
Binding-protein-dependent transport systems inner membrane component (275 aa)
   
        0.500
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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