Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4637PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL3248 putative acetyltransferase. (193 aa)    
Predicted Functional Partners:
Noca_3559
PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL1305 putative acetyltransferase.
  
   
 0.621
Noca_4636
Hypothetical protein.
       0.578
Noca_0794
PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_0377 ribosomal-protein-alanine N-acetyltransferase.
  
     0.572
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.491
Noca_4635
PFAM: ROK family protein; KEGG: sma:SAV1081 ROK-family transcriptional regulator.
       0.421
Noca_4633
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmf:LMOf2365_0191 sugar ABC transporter, permease protein; TC 3.A.1.1.-.
       0.413
Noca_4634
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins; TC 3.A.1.1.-.
       0.413
Noca_4287
PFAM: GCN5-related N-acetyltransferase; KEGG: cef:CE0548 hypothetical protein.
 
     0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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