STRINGSTRING
Noca_4645 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4645" - Patatin in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4645Patatin (310 aa)    
Predicted Functional Partners:
Noca_4644
Hypothetical protein (77 aa)
              0.834
Noca_4643
Sigma-70 factor (217 aa)
              0.834
Noca_4642
Hypothetical protein (78 aa)
              0.834
Noca_4646
Hypothetical protein (111 aa)
              0.666
Noca_4641
Hypothetical protein (154 aa)
              0.632
Noca_4640
Hypothetical protein (246 aa)
              0.632
Noca_4647
NC domain-containing protein (149 aa)
              0.522
Noca_4648
GtrA family protein (165 aa)
              0.471
Noca_1061
Fumarase (571 aa)
              0.455
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
   
        0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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