STRINGSTRING
Noca_4648 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4648" - GtrA family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4648GtrA family protein (165 aa)    
Predicted Functional Partners:
Noca_4647
NC domain-containing protein (149 aa)
              0.763
Noca_1984
Hypothetical protein (172 aa)
   
          0.605
Noca_4646
Hypothetical protein (111 aa)
              0.592
Noca_0934
Hypothetical protein (88 aa)
   
          0.581
Noca_1441
Hypothetical protein (172 aa)
   
          0.542
Noca_3128
Hypothetical protein (601 aa)
   
          0.540
Noca_1943
Hypothetical protein (289 aa)
   
          0.535
Noca_2650
Transcriptional regulator-like protein (323 aa)
   
          0.525
Noca_0008
Hypothetical protein (172 aa)
   
          0.503
Noca_3675
Hypothetical protein (209 aa)
   
          0.496
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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