STRINGSTRING
Noca_4652 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4652" - Transposase, IS111A/IS1328/IS1533 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4652Transposase, IS111A/IS1328/IS1533 (500 aa)    
Predicted Functional Partners:
Noca_3830
Ferric reductase domain-containing protein (195 aa)
   
          0.642
Noca_4651
Hypothetical protein (453 aa)
          0.616
Noca_1024
Transposase IS116/IS110/IS902 family protein (412 aa)
   
          0.603
Noca_2125
Transposase IS116/IS110/IS902 family protein (412 aa)
   
          0.603
Noca_1024
Transposase IS116/IS110/IS902 family protein (412 aa)
   
          0.603
Noca_1720
Transposase IS116/IS110/IS902 family protein (409 aa)
   
          0.598
Noca_1720
Transposase IS116/IS110/IS902 family protein (409 aa)
   
          0.598
Noca_2235
Transposase IS116/IS110/IS902 family protein (444 aa)
   
          0.593
Noca_2264
Phage integrase family protein (797 aa)
   
          0.541
Noca_2264
Phage integrase family protein (797 aa)
   
          0.541
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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