STRINGSTRING
Noca_4670 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4670" - Peptidase S8/S53 subtilisin kexin sedolisin in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4670Peptidase S8/S53 subtilisin kexin sedolisin (531 aa)    
Predicted Functional Partners:
Noca_4669
Hypothetical protein (811 aa)
 
          0.971
Noca_4672
Sigma-70 region 2 domain-containing protein (203 aa)
 
          0.967
Noca_4671
Hypothetical protein (153 aa)
              0.824
Noca_2699
Hypothetical protein (451 aa)
   
          0.709
Noca_4606
N-acetyltransferase GCN5 (308 aa)
   
          0.631
Noca_4382
Regulatory protein LuxR (1006 aa)
   
          0.585
Noca_0927
Hypothetical protein (341 aa)
   
          0.577
Noca_1454
Hypothetical protein (473 aa)
   
          0.571
Noca_4673
Methicillin resistance protein (383 aa)
              0.567
Noca_4674
Alanine racemase domain-containing protein (351 aa)
              0.565
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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