Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4673PFAM: Methicillin resistance protein; KEGG: sco:SCO3593 hypothetical protein. (383 aa)    
Predicted Functional Partners:
Noca_4674
PFAM: alanine racemase domain protein; KEGG: sco:SCO3903 hypothetical protein.
 
   
 0.963
Noca_0518
PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sma:SAV3383 lipoprotein.
 
    0.781
Noca_3369
KEGG: dra:DR0603 cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domains protein.
 
     0.689
Noca_3929
KEGG: sma:SAV3898 integral membrane protein.
  
     0.598
Noca_0449
KEGG: sco:SCO3402 secreted protein.
  
     0.577
Noca_1714
KEGG: mpa:MAP3318c hypothetical protein.
  
     0.576
Noca_3103
PFAM: flavin reductase domain protein, FMN-binding; KEGG: rpb:RPB_1003 flavin reductase-like, FMN-binding.
  
     0.536
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
 
     0.531
Noca_4669
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sco:SCO6994 hypothetical protein.
     
 0.520
Noca_4672
PFAM: sigma-70 region 2 domain protein; KEGG: sco:SCO6996 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.514
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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