STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4684SMART: serine/threonine protein kinase; KEGG: pac:PPA2303 probable serine-threonine protein kinase. (622 aa)    
Predicted Functional Partners:
Noca_4683
TIGRFAM: integral membrane protein MviN; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: sma:SAV4052 transmembrane protein.
 
    0.931
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
 
     0.849
Noca_0026
PFAM: protein phosphatase 2C domain protein; KEGG: sco:SCO3845 putative protein phosphatase.
 
 
 0.834
Noca_1982
PFAM: protein phosphatase 2C domain protein; KEGG: cef:CE0037 putative protein phosphatase.
 
 
 0.815
Noca_0022
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3066 tyrosine protein kinase:serine/threonine protein kinase:PASTA.
 
 
 0.813
Noca_3942
PFAM: protein phosphatase 2C domain protein; KEGG: lxx:Lxx12030 protein phosphatase.
 
 
 0.808
Noca_4685
RNA polymerase, sigma subunit, ECF family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV4303 putative RNA polymerase ECF-subfamily sigma factor.
   
 
 0.779
Noca_2005
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0015 serine/threonine protein kinase.
  
     0.768
Noca_3365
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_0592 tyrosine protein kinase:serine/threonine protein kinase.
  
     0.766
Noca_4496
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_0454 tyrosine protein kinase:serine/threonine protein kinase.
  
     0.759
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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