STRINGSTRING
Noca_4690 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4690" - Class I and II aminotransferase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4690Class I and II aminotransferase (439 aa)    
Predicted Functional Partners:
Noca_4691
D-alanine--D-alanine ligase; Cell wall formation (323 aa)
 
          0.959
Noca_2500
Prephenate dehydrogenase (361 aa)
       
  0.955
Noca_4692
Phospholipid/glycerol acyltransferase (258 aa)
              0.783
Noca_4689
N-acetyltransferase GCN5 (224 aa)
              0.706
Noca_3645
Inosine-5’-monophosphate dehydrogenase (500 aa)
   
 
    0.693
Noca_2608
Inosine 5-monophosphate dehydrogenase (478 aa)
   
 
    0.693
Noca_3367
Branched chain amino acid aminotransferase (357 aa)
   
 
  0.693
Noca_0900
Alanine racemase; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (378 aa)
   
 
    0.639
Noca_0170
Prephenate dehydratase (287 aa)
         
  0.571
Noca_1744
Homoserine dehydrogenase (441 aa)
     
  0.549
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (14%) [HD]