STRINGSTRING
Noca_4696 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4696" - Single-stranded nucleic acid binding R3H domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4696Single-stranded nucleic acid binding R3H domain-containing protein (192 aa)    
Predicted Functional Partners:
Noca_4697
Putative inner membrane protein translocase component YidC (363 aa)
 
   
  0.933
Noca_4694
Chromosome segregation ATPase (361 aa)
 
        0.914
Noca_3259
Hypothetical protein (80 aa)
   
      0.896
Noca_4698
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane (92 aa)
   
        0.882
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (117 aa)
              0.878
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 518 of 16S rRNA (250 aa)
   
   
  0.877
Noca_4693
Chromosome segregation DNA-binding protein (318 aa)
   
   
  0.873
rpmH
50S ribosomal protein L34 (45 aa)
         
  0.823
Noca_1712
Histidine kinase, dimerisation/phosphoacceptor (491 aa)
   
          0.638
Noca_3452
Ribonuclease G (1070 aa)
       
      0.630
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (11%) [HD]