STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10740407Putative transcription regulator. (403 aa)    
Predicted Functional Partners:
gene:10742813
Putative transcription regulator.
  
     0.773
gene:10740409
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.765
BAC16829.1
Putative lipoprotein; CE0019, similar to AL132824-22|CAB60176.1| percent identity: 45 in 319 aa.
 
  
 0.719
gltB
Glutamate synthase large subunit; CE0158, similar to D85230-3|BAA12741.1| percent identity: 53 in 1495 aa.
    
 
 0.715
BAC16831.1
Putative sugar transport ATP-binding protein; CE0021, similar to AL132824-24|CAB60178.1| percent identity: 63 in 252 aa.
 
  
 0.707
BAC18640.1
Putative PTS phosphohistidine-containing protein; CE1830, similar to AX151741-1|CAC42595.1| percent identity: 91 in 89 aa.
   
 
 0.597
BAC16827.1
Putative ABC transporter permease protein; CE0017, similar to AX066773-1|CAC26614.1| percent identity: 44 in 530 aa.
  
   0.583
gene:10742754
Putative transcription regulator.
  
   
 0.515
ptsM
PTS glucose-specific IIABC; CE1458, similar to L18875-1|AAA22992.1| percent identity: 83 in 687 aa.
  
  
 0.509
gene:10742257
Putative PTS fructose-specific enzyme IIABC component.
     
 0.487
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.