STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC16831.1Putative sugar transport ATP-binding protein; CE0021, similar to AL132824-24|CAB60178.1| percent identity: 63 in 252 aa. (253 aa)    
Predicted Functional Partners:
BAC16829.1
Putative lipoprotein; CE0019, similar to AL132824-22|CAB60176.1| percent identity: 45 in 319 aa.
 
 0.999
gene:10740409
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
ptsM
PTS glucose-specific IIABC; CE1458, similar to L18875-1|AAA22992.1| percent identity: 83 in 687 aa.
   
  
 0.714
gene:10740407
Putative transcription regulator.
 
  
 0.707
gene:10742257
Putative PTS fructose-specific enzyme IIABC component.
     
 0.649
rbsK
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.526
BAC16833.1
Putative glutamyl-tRNA(Gln) amidotransferase subunit A; CE0023, similar to AF058285-1|AAC77368.1| percent identity: 40 in 465 aa; Belongs to the amidase family.
     
 0.434
gene:10740411
Uncharacterized protein.
       0.405
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.