Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAC16888.1Conserved hypothetical protein; CE0078, similar to AL590507-9|CAC36370.1| percent identity: 33 in 333 aa. (381 aa)    
Predicted Functional Partners:
gene:10740469
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.675
BAC16890.1
Conserved hypothetical protein; CE0080, similar to AL627270-196|CAD01823.1| percent identity: 25 in 416 aa.
       0.458
BAC19444.1
Hypothetical protein; CE2634.
 
    0.417
gene:10740463
Magnesium transporter MgtE; Acts as a magnesium transporter.
 
   
 0.412
gene:10742452
Uncharacterized protein.
  
    0.406
BAC17994.1
Conserved hypothetical protein; CE1184, similar to AE007003-4|AAK45528.1| percent identity: 52 in 417 aa.
 
   
 0.403
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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