STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDAspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (136 aa)    
Predicted Functional Partners:
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
 
 
 0.991
BAC19344.1
Putative pantoate-beta-alanine ligase; CE2534, similar to AX064337-1|CAC25409.1| percent identity: 71 in 264 aa; Belongs to the pantothenate synthetase family.
 
 
 0.989
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.955
gene:10740469
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.910
BAC17365.1
Putative aldehyde dehydrogenase; CE0555, similar to AX065837-1|CAC26158.1| percent identity: 82 in 495 aa.
     
 0.910
BAC19146.1
Putative aminotransferase; CE2336, similar to AX244017-1|CAC88487.1| percent identity: 73 in 452 aa; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.910
gene:10742467
Putative L-asparaginase.
     
 0.820
gene:10742791
Putative L-asparaginase.
     
 0.820
aspA
Aspartate ammonia-lyase; CE1633, similar to AX063841-1|CAC25162.1| percent identity: 83 in 507 aa.
     
 0.817
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.808
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.