STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10740540Abhydrolase_3 domain-containing protein. (311 aa)    
Predicted Functional Partners:
BAC19515.1
Putative polyketide synthase; CE2705, similar to AX066431-1|CAC26443.1| percent identity: 80 in 1652 aa.
  
 
 0.915
BAC19697.1
Conserved hypothetical protein; CE2887, similar to Z99109-115|CAB12879.1| percent identity: 34 in 499 aa.
  
   0.676
BAC19183.1
Hypothetical protein; CE2373.
  
 
 0.669
acpP
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.667
gene:10741048
NAD(P)-bd_dom domain-containing protein.
  
   0.629
gene:10741756
Uncharacterized protein.
  
   0.629
qcrA
Cytochrome bc1 complex Rieske iron-sulfur subunit; Iron-sulfur subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis; Belongs to the Rieske iron-sulfur protein family.
    
   0.624
BAC16961.1
Putative defensin; CE0151, similar to SwissProt:P80407 percent identity: 38 in 29 aa.
       0.572
gene:10742280
Putative ABC transporter ATP-binding protein.
      
 0.457
gene:10742539
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.456
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.