STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10740632Putative glycerate kinase; Belongs to the glycerate kinase type-1 family. (406 aa)    
Predicted Functional Partners:
gene:10742411
Putative glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
  
 
0.923
gene:10740469
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.901
gpmA
Putative phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.901
BAC17365.1
Putative aldehyde dehydrogenase; CE0555, similar to AX065837-1|CAC26158.1| percent identity: 82 in 495 aa.
   
 
  0.901
BAC17047.1
Conserved hypothetical protein; CE0237, similar to AE004211-5|AAF94472.1| percent identity: 21 in 465 aa.
 
     0.783
gene:10740634
Uncharacterized protein.
       0.724
BAC17049.1
Hypothetical protein; CE0239.
       0.709
BAC17045.1
Hypothetical protein; CE0235.
       0.567
BAC17043.1
Putative transcription regulator; CE0233, similar to Z99494-27|CAB16701.1| percent identity: 40 in 223 aa.
       0.498
tadA
Conserved hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.490
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.