STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC17088.1Sensory transduction protein; CE0278, similar to AL591983-180|CAD00579.1| percent identity: 42 in 227 aa. (240 aa)    
Predicted Functional Partners:
gene:10740676
Putative sensor kinase.
 
 0.988
gene:10740822
Putative sensor kinase.
 
 0.883
gene:10742939
Putative sensor kinase.
 
 0.880
BAC17580.1
Putative sensor histidine kinase; CE0770, similar to AE007145-5|AAK47685.1| percent identity: 52 in 483 aa.
 
 0.873
BAC17759.1
Two-component system sensor kinase; CE0949, similar to AL354616-2|CAB89748.1| percent identity: 35 in 455 aa.
 
 0.844
BAC17086.1
Conserved hypothetical protein; CE0276, similar to AJ414145-167|CAC89846.1| percent identity: 39 in 201 aa.
  
  
 0.821
gene:10740630
Putative sensor kinase.
 
 0.805
gene:10740674
Uncharacterized protein.
       0.639
gene:10740678
Putative copper-transporting ATPase.
 
   
 0.531
gene:10741311
Peptidyl-prolyl cis-trans isomerase.
      
 0.517
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.