STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC17124.1Hypothetical protein; CE0314. (181 aa)    
Predicted Functional Partners:
BAC17126.1
Hypothetical protein; CE0316.
 
     0.934
gene:10740713
Uncharacterized protein.
 
     0.867
BAC17122.1
Putative cytochrome c-type biogenesis protein; CE0312, similar to AL596162-29|CAC44608.1| percent identity: 39 in 263 aa.
 
     0.859
gene:10740711
Thioredoxin domain-containing protein.
 
   
 0.818
BAC17275.1
Putative cytochrome c biogenesis protein; CE0465, similar to U00018-1|AAA17249.1| percent identity: 43 in 354 aa.
  
  
 0.439
zupT
Conserved hypothetical protein; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
   
    0.424
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.