STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10740713Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
BAC17126.1
Hypothetical protein; CE0316.
 
    0.960
BAC17124.1
Hypothetical protein; CE0314.
 
     0.867
BAC17122.1
Putative cytochrome c-type biogenesis protein; CE0312, similar to AL596162-29|CAC44608.1| percent identity: 39 in 263 aa.
 
     0.681
gene:10740711
Thioredoxin domain-containing protein.
 
     0.666
gene:10740465
HMA domain-containing protein.
  
  
 0.571
BAC19623.1
Conserved hypothetical protein; CE2813, similar to AX065969-1|CAC26224.1| percent identity: 66 in 65 aa.
  
  
 0.571
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.