STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC17140.1Putative alcohol dehydrogenase; CE0330, similar to AX065615-1|CAC26047.1| percent identity: 90 in 368 aa. (380 aa)    
Predicted Functional Partners:
gene:10740729
Lactamase_B domain-containing protein.
 
  
 0.916
gene:10740727
Putative beta-glucosidase.
       0.745
gene:10743342
Putative maleylacetate reductase.
   
 
 0.653
gene:10740804
Uncharacterized protein.
  
  
 0.601
BAC17142.1
Hypothetical protein; CE0332.
  
    0.545
gene:10740731
Putative dTDP-glucose 4-epimerase.
       0.534
gene:10740754
Uncharacterized protein.
  
 
 0.526
BAC17794.1
Putative surface layer protein; CE0984, similar to AB055224-1|BAB62413.1| percent identity: 32 in 334 aa.
  
 
 0.526
BAC18298.1
Putative PS1 protein; CE1488, similar to AB055224-1|BAB62413.1| percent identity: 31 in 287 aa.
  
 
 0.526
gene:10743158
Putative PS1 protein.
  
 
 0.526
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.