STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10740778Putative GDP-D-mannose dehydratase. (307 aa)    
Predicted Functional Partners:
BAC19472.1
Putative UDP-glucose dehydrogenase; CE2662, similar to AE000669-16|AAC06391.1| percent identity: 41 in 437 aa.
 
 0.977
BAC19529.1
Putative UDP-galactopyranose mutase; CE2719, similar to AX065129-1|CAC25804.1| percent identity: 85 in 401 aa.
  
 
 0.968
galE
UDP-glucose 4-epimerase; CE1813, similar to M80338-3|AAA23300.1| percent identity: 78 in 328 aa; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
0.947
gene:10740731
Putative dTDP-glucose 4-epimerase.
 
 
0.935
BAC17153.1
Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.931
gene:10741022
Putative UTP--glucose-1-phosphate uridylyltransferase.
 
 
 0.925
gene:10741362
Putative UTP--glucose-1-phosphate uridylyltransferase.
 
 
 0.924
gene:10740449
Epimerase domain-containing protein.
  
 
 0.909
BAC17191.1
Putative lipopolysaccharide biosynthesis protein; CE0381, similar to D14156-2|BAA03192.1| percent identity: 62 in 422 aa; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.863
gene:10740740
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.784
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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