STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741013Putative gluconate permease protein. (464 aa)    
Predicted Functional Partners:
BAC17371.1
Conserved hypothetical protein; CE0561, similar to AX064957-1|CAC25718.1| percent identity: 85 in 365 aa.
   
    0.664
gene:10742821
Gluconokinase.
 
  
 0.604
gene:10743290
Putative gluconokinase.
 
  
 0.584
BAC17420.1
Hypothetical protein; CE0610.
       0.572
BAC17422.1
Putative monooxygenase protein; CE0612, similar to AE008212-1|AAK88711.1| percent identity: 62 in 585 aa.
  
    0.462
gene:10740632
Putative glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.406
gene:10742860
Putative transcription factor.
 
   
 0.405
gene:10742411
Putative glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.404
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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