STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741050Putative glycosyl transferase. (265 aa)    
Predicted Functional Partners:
crtYe
C50 carotenoid epsilon cyclase; CE0639, similar to AF159510-5|AAK64300.1| percent identity: 71 in 114 aa.
 
   
 0.737
BAC17461.1
Putative regulatory protein; CE0651, similar to AE005005-3|AAG19060.1| percent identity: 36 in 215 aa.
  
    0.732
BAC17459.1
Hypothetical protein; CE0649.
       0.724
gene:10741052
Uncharacterized protein.
       0.724
crtYf
C50 carotenoid epsilon cyclase; CE0638, similar to Z21955-7|CAA79961.1| percent identity: 25 in 110 aa.
 
   
 0.710
crtEb
Lycopene elongase; CE0637, similar to AF159510-7|AAK64302.1| percent identity: 74 in 287 aa.
 
   
 0.661
crtB
Phytoene synthase; CE0641, similar to AF159510-3|AAK64298.1| percent identity: 69 in 294 aa.
 
  
 0.608
idi
Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
   
 0.602
BAC17457.1
Deoxyribodipyrimidine photolyase; CE0647, similar to AF159509-2|AAK64295.1| percent identity: 64 in 483 aa; Belongs to the DNA photolyase family.
       0.582
crtI
Phytoene desaturase; CE0640, similar to AF159510-4|AAK64299.1| percent identity: 79 in 524 aa.
 
   
 0.551
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.