STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC17504.1Putative ferrichrome ABC transporter permease protein; CE0694, similar to AE001826-15|AAF12576.1| percent identity: 40 in 332 aa; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (335 aa)    
Predicted Functional Partners:
gene:10741095
Membrane-bound iron(III) dicitrate transport protein.
 
 
 0.980
BAC17502.1
Conserved hypothetical protein; CE0692, similar to AP001512-172|BAB05304.1| percent identity: 23 in 325 aa.
 
 
 0.961
gene:10743123
Putative ABC transporter ATP-binding protein.
 
 
 0.922
BAC18821.1
Putative iron ABC transporter ATP-binding protein; CE2011, similar to AL109848-25|CAB52849.1| percent identity: 34 in 270 aa.
 
 
 0.895
BAC17494.1
Putative iron transporter ATP-binding protein; CE0684, similar to AF176902-3|AAD53128.1| percent identity: 56 in 265 aa.
 
 
 0.890
BAC18823.1
Putative iron ABC transporter substrate-binding protein; CE2013, similar to AE005056-15|AAG19697.1| percent identity: 27 in 312 aa.
 
 
 0.879
BAC19486.1
Conserved hypothetical protein; CE2676, similar to AL359215-17|CAB94641.1| percent identity: 23 in 320 aa.
 
 
 0.752
gene:10741089
Putative lipoprotein.
  
 
 0.628
gene:10741097
Uncharacterized protein.
       0.570
trpS
Putative tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.541
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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