STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741097Uncharacterized protein. (55 aa)    
Predicted Functional Partners:
trpS
Putative tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.732
BAC17502.1
Conserved hypothetical protein; CE0692, similar to AP001512-172|BAB05304.1| percent identity: 23 in 325 aa.
       0.570
gene:10741095
Membrane-bound iron(III) dicitrate transport protein.
       0.570
BAC17504.1
Putative ferrichrome ABC transporter permease protein; CE0694, similar to AE001826-15|AAF12576.1| percent identity: 40 in 332 aa; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.570
gene:10741099
Uncharacterized protein.
       0.435
BAC17508.1
Hypothetical protein; CE0698.
       0.435
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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