STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741103NLPC_P60 domain-containing protein. (321 aa)    
Predicted Functional Partners:
BAC17512.1
Hypothetical protein; CE0702.
       0.781
gene:10741105
Uncharacterized protein.
       0.773
upp
Putative uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.702
gene:10741107
HTH cro/C1-type domain-containing protein.
       0.702
BAC17510.1
Conserved hypothetical protein; CE0700, similar to AE007149-10|AAK47753.1| percent identity: 34 in 403 aa.
       0.695
gene:10741101
Putative penicillin-binding protein; Belongs to the peptidase S11 family.
 
   
 0.686
gene:10741377
G5 domain-containing protein.
   
  
 0.578
gene:10740519
Uncharacterized protein.
  
   
 0.570
ctaC
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (By similarity).
      
 0.463
BAC18247.1
Conserved hypothetical protein; CE1437, similar to AL034447-9|CAA22408.1| percent identity: 33 in 549 aa.
      
 0.461
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.