STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC17523.1Putative urea carboxylase; CE0713, similar to AE005857-5|AAK23804.1| percent identity: 53 in 1199 aa. (1202 aa)    
Predicted Functional Partners:
accDA
Putative carboxyltransferase subunit of acetyl-CoA carboxylase; CE0907, similar to AX066443-1|CAC26449.1| percent identity: 62 in 480 aa.
 
 
 0.999
gene:10741112
Urea carboxylase.
  
 0.998
fasA
Fatty-acid synthase I; CE0913, similar to AE007096-1|AAK46907.1| percent identity: 45 in 2953 aa.
  
  
 0.991
fasB
Fatty-acid synthase II; CE2392, similar to X64795-1|CAA46024.1| percent identity: 62 in 2997 aa.
  
  
 0.991
BAC17874.1
Conserved hypothetical protein; CE1064, similar to AE008292-9|AAK89507.1| percent identity: 37 in 306 aa.
 
 
0.978
BAC17614.1
Putative methylmalonyl-CoA carboxyltransferase 5S chain; CE0804, similar to AE006178-6|AAK03506.1| percent identity: 49 in 495 aa.
 
 
 0.969
gene:10741116
DUF1989 domain-containing protein.
 
   
 0.952
BAC17525.1
Conserved hypothetical protein; CE0715, similar to AE005857-3|AAK23802.1| percent identity: 41 in 267 aa.
 
   
 0.952
BAC17550.1
CE0740, similar to AL512667-19|CAC21623.1| percent identity: 40 in 274 aa.
  
 0.911
ureC
Urease alpha subunit; CE0995, similar to Y13732-6|CAA74065.1| percent identity: 64 in 571 aa; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
     
 0.910
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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