STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741118Uncharacterized protein. (502 aa)    
Predicted Functional Partners:
gene:10741120
Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.996
BAC17527.1
Putative carboxyphosphonoenolpyruvate phosphonomutase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
 
  
 0.989
BAC17195.1
Putative transcription regulator; CE0385, similar to AL021933-8|CAA17420.1| percent identity: 57 in 475 aa.
 
  
 0.841
gltA
Citrate synthase; CE0905, similar to X66112-1|CAA46902.1| percent identity: 92 in 435 aa; Belongs to the citrate synthase family.
  
  
 0.761
gene:10741517
Uncharacterized protein.
 
  
 0.721
aceA
Isocitrate lyase; Involved in the metabolic adaptation in response to environmental changes. Catalyzes the reversible formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle during growth on fatty acid substrates.
      
 0.578
citE
Citrate lyase; CE0938, similar to AE005011-2|AAG19130.1| percent identity: 33 in 288 aa; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.555
BAC17523.1
Putative urea carboxylase; CE0713, similar to AE005857-5|AAK23804.1| percent identity: 53 in 1199 aa.
  
    0.415
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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