STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741211Putative biotin carboxyl carrier protein. (120 aa)    
Predicted Functional Partners:
BAC17614.1
Putative methylmalonyl-CoA carboxyltransferase 5S chain; CE0804, similar to AE006178-6|AAK03506.1| percent identity: 49 in 495 aa.
 
  
  0.994
gene:10741209
Putative acyl-CoA carboxylase beta subunit.
 
 0.990
BAC17616.1
Putative partial methylmalonyl-CoA carboxyltransferase; CE0806, similar to L04196-1|AAA25676.1| percent identity: 34 in 79 aa.
 
  
  0.982
BAC17541.1
Putative acetyl-CoA acetyltransferase; CE0731, similar to AL137242-3|CAB70629.1| percent identity: 56 in 396 aa; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.902
BAC19105.1
Putative acetyl-CoA acetyltransferase; CE2295, similar to AX066513-1|CAC26484.1| percent identity: 82 in 395 aa; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.902
accBC
acyl-CoA carboxylase; CE0719, similar to AX066441-1|CAC26448.1| percent identity: 91 in 456 aa.
 
 
0.878
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 
 0.834
masZ
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 0.834
gene:10743038
Phosphate acetyltransferase.
   
 
 0.830
gene:10740922
Putative acetate CoA-transferase.
   
 
 0.823
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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