STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC17640.1Hypothetical protein; CE0830. (98 aa)    
Predicted Functional Partners:
BAC17636.1
Hypothetical protein; CE0826.
       0.773
gene:10741231
HTH_17 domain-containing protein.
       0.773
BAC17638.1
Conserved hypothetical protein; CE0828, similar to AP003360-236|BAB57017.1| percent identity: 32 in 241 aa.
       0.773
gene:10741233
Uncharacterized protein.
       0.773
gene:10741229
Uncharacterized protein.
       0.586
gene:10741235
Uncharacterized protein.
       0.441
BAC17642.1
Hypothetical protein; CE0832.
       0.428
gene:10741237
Uncharacterized protein.
       0.428
BAC17644.1
Hypothetical protein; CE0834.
       0.428
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.