STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC17878.1Putative transcription regulator; CE1068, similar to AE008302-1|AAK89592.1| percent identity: 25 in 219 aa. (253 aa)    
Predicted Functional Partners:
BAC17882.1
Putative transcription regulator; CE1072, similar to AL591791-34|CAC47127.1| percent identity: 28 in 206 aa.
  
     0.757
gene:10741475
Uncharacterized protein.
       0.675
gene:10742860
Putative transcription factor.
  
  
 0.655
BAC17874.1
Conserved hypothetical protein; CE1064, similar to AE008292-9|AAK89507.1| percent identity: 37 in 306 aa.
       0.609
pxpA
Putative lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.609
gene:10741477
Uncharacterized protein.
       0.523
gene:10743205
Putative transcription regulator.
  
  
 0.516
gene:10741473
AHS1 domain-containing protein.
       0.477
BAC17880.1
Hypothetical protein; CE1070.
       0.464
gene:10742966
HTH gntR-type domain-containing protein.
  
  
 0.417
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.