STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741599Putative multidrug resistance protein. (1242 aa)    
Predicted Functional Partners:
gene:10742854
Uncharacterized protein.
  
 
   0.670
BAC18560.1
Hypothetical protein; CE1750.
 
     0.652
gene:10743030
Uncharacterized protein.
  
  0.651
gene:10743220
RNase_H_2 domain-containing protein.
  
     0.646
BAC19157.1
Hypothetical protein; CE2347.
  
     0.633
gene:10742823
Uncharacterized protein.
  
     0.630
odhA
2-oxoglutarate dehydrogenase E1 component; CE1190, similar to D84102-1|BAA12222.1| percent identity: 87 in 1234 aa.
   
 
 0.579
gene:10743106
Uncharacterized protein.
 
     0.544
BAC19633.1
Putative membrane protein; CE2823, similar to AF187306-1|AAF25828.1| percent identity: 41 in 507 aa.
  
     0.541
gene:10741537
YkuD domain-containing protein.
 
     0.531
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.