STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC18048.1Insertion element conserved hypothetical protein; CE1238, similar to X79443-2|CAA55960.1| percent identity: 31 in 182 aa. (202 aa)    
Predicted Functional Partners:
gene:10741645
Putative transposase.
 
    0.948
gene:10741653
AAA domain-containing protein.
 
     0.814
BAC17177.1
Conserved hypothetical protein; CE0367, similar to AE009417-3|AAL45688.1| percent identity: 27 in 486 aa.
 
    0.782
gene:10740904
Putative transposase.
 
    0.782
BAC18032.1
Insertion element conserved hypothetical protein; CE1222, similar to AE000099-8|AAB91881.1| percent identity: 29 in 434 aa.
 
    0.782
gene:10741641
Putative transposase.
 
    0.782
BAC18278.1
Conserved hypothetical protein; CE1468, similar to AF292393-1|AAK12893.1| percent identity: 32 in 354 aa.
 
    0.782
gene:10742541
Putative transposase.
 
    0.782
gene:10743150
annotation not available
 
    0.782
BAC18054.1
Putative transposase; CE1244, similar to D64144-1|BAA33969.1| percent identity: 28 in 462 aa.
 
    0.777
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.