STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10741758Putative transcription regulator. (363 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit; CE0158, similar to D85230-3|BAA12741.1| percent identity: 53 in 1495 aa.
    
 
 0.715
BAC18640.1
Putative PTS phosphohistidine-containing protein; CE1830, similar to AX151741-1|CAC42595.1| percent identity: 91 in 89 aa.
 
 
 
 0.662
rbsK
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.627
pfkA
Putative 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
   
 
 0.584
gene:10742754
Putative transcription regulator.
  
   
 0.554
BAC19535.1
Putative transcription regulator; CE2725, similar to AL359214-28|CAB94616.1| percent identity: 37 in 256 aa.
  
   
 0.530
ptsM
PTS glucose-specific IIABC; CE1458, similar to L18875-1|AAA22992.1| percent identity: 83 in 687 aa.
  
  
 0.509
BAC17940.1
Putative transcription regulator; CE1130, similar to Z80226-37|CAB02406.1| percent identity: 27 in 246 aa.
  
   
 0.508
BAC18160.1
Conserved hypothetical protein; CE1350, similar to AL136519-25|CAB66294.1| percent identity: 39 in 194 aa.
       0.505
gene:10742257
Putative PTS fructose-specific enzyme IIABC component.
     
 0.487
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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