STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC18302.1TnpC protein; CE1492, similar to AJ420072-16|CAD12220.1| percent identity: 76 in 235 aa. (266 aa)    
Predicted Functional Partners:
BAC18300.1
TnpC protein; CE1491, similar to AJ420072-16|CAD12220.1| percent identity: 72 in 139 aa.
     0.970
BAC19667.1
Hypothetical protein; CE2857.
 
     0.821
gene:10741906
TnpC protein.
 
     0.780
gene:10741904
Uncharacterized protein.
       0.658
BAC18298.1
Putative PS1 protein; CE1488, similar to AB055224-1|BAB62413.1| percent identity: 31 in 287 aa.
       0.494
gene:10740652
Transposase.
  
     0.471
BAC19691.1
Putative transposase; CE2881, similar to Z92539-28|CAB06871.1| percent identity: 32 in 114 aa.
  
     0.420
gene:10741908
Methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.417
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.