STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC18372.1Hypothetical protein; CE1562. (203 aa)    
Predicted Functional Partners:
gene:10741981
Methyltransf_11 domain-containing protein.
     
 0.773
gene:10742259
AraC_E_bind domain-containing protein.
  
     0.755
BAC17086.1
Conserved hypothetical protein; CE0276, similar to AJ414145-167|CAC89846.1| percent identity: 39 in 201 aa.
  
     0.601
rpoB
Putative DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.594
BAC18374.1
Putative ABC transporter permease protein; CE1564, similar to X89010-3|CAA61416.1| percent identity: 26 in 495 aa.
       0.550
gene:10741983
Putative ABC transporter permease protein.
       0.550
gene:10743113
PBPb domain-containing protein.
  
     0.464
zupT
Conserved hypothetical protein; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
       0.446
gene:10741829
Uncharacterized protein.
  
     0.418
BAC19476.1
Hypothetical protein; CE2666.
  
     0.417
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.