STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lppLPutative prolipoprotein LppL; CE1642, similar to AF024666-10|AAG03364.1| percent identity: 41 in 326 aa. (340 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.840
BAC18008.1
Hypothetical protein; CE1198.
  
    0.826
BAC17595.1
Conserved hypothetical protein; CE0785, similar to Z95120-10|CAB08304.1| percent identity: 28 in 397 aa.
 
  
 0.791
BAC17386.1
Hypothetical protein; CE0576.
 
 
   0.780
gene:10741770
Uncharacterized protein.
 
     0.777
gene:10743380
Uncharacterized protein.
  
   
 0.777
BAC18243.1
Hypothetical protein; CE1433.
  
     0.774
gene:10743045
Uncharacterized protein.
  
     0.774
BAC18716.1
Conserved hypothetical protein; CE1906, similar to Z74024-7|CAA98352.1| percent identity: 35 in 87 aa.
  
     0.773
BAC17769.1
Conserved hypothetical protein; CE0959, similar to AE006986-8|AAK45272.1| percent identity: 26 in 387 aa.
  
     0.771
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.