STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tetBABC transporter TetB; CE1646, similar to AL109974-12|CAB53323.1| percent identity: 33 in 599 aa. (612 aa)    
Predicted Functional Partners:
tetA
ABC transporter TetA; CE1647, similar to U21300-3|AAC95479.1| percent identity: 40 in 520 aa.
 
    0.950
metN
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
0.885
BAC18374.1
Putative ABC transporter permease protein; CE1564, similar to X89010-3|CAA61416.1| percent identity: 26 in 495 aa.
    0.757
BAC18253.1
Putative amino acid ABC transporter ATP-binding protein; CE1443, similar to AE007304-3|AAK65843.1| percent identity: 58 in 253 aa.
 
     
0.712
BAC18821.1
Putative iron ABC transporter ATP-binding protein; CE2011, similar to AL109848-25|CAB52849.1| percent identity: 34 in 270 aa.
 
    0.711
gene:10740844
Putative ABC transporter ATP-binding protein.
 
   
0.705
BAC18455.1
Conserved hypothetical protein; CE1645, similar to AF024666-8|AAG03362.1| percent identity: 65 in 176 aa.
       0.671
gene:10742063
Uncharacterized protein.
       0.646
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.639
gluA
Glutamate transporter ATP-binding protein GluA; Part of the binding-protein-dependent transport system for glutamate. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily.
 
     
0.550
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.