STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gluBGlutamate-binding protein GluB; Part of the binding-protein-dependent transport system for glutamate; Belongs to the bacterial solute-binding protein 3 family. (294 aa)    
Predicted Functional Partners:
gluC
Glutamate transport system permease protein GluC; Part of the binding-protein-dependent transport system for glutamate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
 
 0.996
gluD
Glutamate transporter permease protein GluD; Part of the binding-protein-dependent transport system for glutamate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
 
 0.992
gluA
Glutamate transporter ATP-binding protein GluA; Part of the binding-protein-dependent transport system for glutamate. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily.
 
 0.990
gene:10741998
Glutamate periplasmic binding protein.
  
  
 
0.903
BAC18253.1
Putative amino acid ABC transporter ATP-binding protein; CE1443, similar to AE007304-3|AAK65843.1| percent identity: 58 in 253 aa.
 
 
 0.853
gene:10741858
Putative amino acid ABC transporter permease protein.
 
 
 0.825
gene:10741860
Putative secreted protein.
 
     0.691
miaB
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.486
gltB
Glutamate synthase large subunit; CE0158, similar to D85230-3|BAA12741.1| percent identity: 53 in 1495 aa.
  
  
 0.446
BAC18652.1
Conserved hypothetical protein; CE1842, similar to AX067069-1|CAC26762.1| percent identity: 69 in 219 aa.
       0.431
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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