STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC19264.1Putative fimbria-associated protein; CE2454, similar to AE006309-6|AAK04857.1| percent identity: 29 in 289 aa. (315 aa)    
Predicted Functional Partners:
gene:10742900
Putative type 1 fimbrial protein.
 
     0.947
gene:10742902
Putative type 1 fimbrial protein.
 
   
 0.893
BAC19268.1
Hypothetical protein; CE2458.
 
   
 0.839
gene:10743185
Putative type 1 fimbrial major subunit.
 
   
 0.779
gene:10742898
Hydrolase_4 domain-containing protein.
       0.773
BAC19266.1
Conserved hypothetical protein; CE2456, similar to AE006309-6|AAK04857.1| percent identity: 28 in 293 aa.
 
    
0.687
BAC19262.1
Conserved hypothetical protein; CE2452, similar to AX066439-1|CAC26447.1| percent identity: 69 in 244 aa.
       0.663
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.