STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC19295.1Conserved hypothetical protein; CE2485, similar to AX064515-1|CAC25497.1| percent identity: 76 in 224 aa. (225 aa)    
Predicted Functional Partners:
gene:10740480
Uncharacterized protein.
  
     0.770
BAC17861.1
Conserved hypothetical protein; CE1051, similar to AE006992-2|AAK45368.1| percent identity: 35 in 150 aa.
  
     0.770
gene:10741770
Uncharacterized protein.
  
     0.766
BAC19208.1
Conserved hypothetical protein; CE2398, similar to U00014-2|AAA50903.1| percent identity: 42 in 94 aa.
  
     0.766
BAC19583.1
Conserved hypothetical protein; CE2773, similar to AE007188-17|AAK48332.1| percent identity: 38 in 208 aa.
  
     0.766
BAC18243.1
Hypothetical protein; CE1433.
  
     0.760
gene:10743045
Uncharacterized protein.
  
     0.760
lppL
Putative prolipoprotein LppL; CE1642, similar to AF024666-10|AAG03364.1| percent identity: 41 in 326 aa.
  
     0.758
gene:10743174
Septum_form domain-containing protein.
  
     0.758
BAC17595.1
Conserved hypothetical protein; CE0785, similar to Z95120-10|CAB08304.1| percent identity: 28 in 397 aa.
  
     0.754
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.