STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC19312.1Putative membrane transport protein; CE2502, similar to AF218267-10|AAF63453.1| percent identity: 32 in 385 aa. (430 aa)    
Predicted Functional Partners:
BAC19117.1
Putative benzoate 1,2-dioxygenase reductase; CE2307, similar to AF279141-3|AAK58905.1| percent identity: 53 in 521 aa.
 
   
 0.742
gene:10743312
Putative transport protein.
      
 0.709
BAC19115.1
Putative benzoate 1,2-dioxygenase reductase; CE2305, similar to AX066065-1|CAC26272.1| percent identity: 86 in 498 aa.
 
   
 0.656
gene:10742737
Putative benzoate 1,2-dioxygenase reductase.
 
   
 0.642
BAC19107.1
Putative transcription regulator; CE2297, similar to AL137165-20|CAB69684.1| percent identity: 27 in 328 aa.
 
     0.571
BAC19119.1
Putative transcription regulator; CE2309, similar to U95170-1|AAD28307.1| percent identity: 23 in 862 aa.
  
     0.544
gene:10742739
Putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.539
gene:10742949
PadR domain-containing protein.
       0.528
BAC19314.1
Hypothetical protein; CE2504.
       0.528
gene:10742947
Uncharacterized protein.
       0.493
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.