STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC19316.1Conserved hypothetical protein; CE2506, similar to AF326510-1|AAK61331.1| percent identity: 78 in 475 aa. (486 aa)    
Predicted Functional Partners:
gene:10742954
Uncharacterized protein.
       0.718
BAC19318.1
Putative trehalose-6-phosphate synthase; CE2508, similar to AX063735-1|CAC25109.1| percent identity: 82 in 478 aa.
       0.672
gene:10742956
Uncharacterized protein.
       0.672
BAC19320.1
Putative trehalose-6-phosphate phophatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
       0.646
gene:10742951
Uncharacterized protein.
 
     0.633
gene:10742823
Uncharacterized protein.
  
     0.498
BAC17611.1
Conserved hypothetical protein; CE0801, similar to AL390968-27|CAC01333.1| percent identity: 30 in 159 aa.
  
     0.474
gene:10742750
Uncharacterized protein.
  
     0.454
gene:10742488
Uncharacterized protein.
 
     0.453
gene:10742199
DUF3817 domain-containing protein.
  
    0.449
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.