STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10742996Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
BAC19360.1
Hypothetical protein; CE2550.
       0.840
gene:10742998
DUF4178 domain-containing protein.
       0.840
gene:10741194
RCK N-terminal domain-containing protein.
      
 0.825
BAC19358.1
Conserved hypothetical protein; CE2548, similar to AL646084-18|CAD18448.1| percent identity: 28 in 141 aa.
       0.803
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
       0.800
BAC19362.1
Hypothetical protein; CE2552.
       0.773
gene:10743000
annotation not available
       0.655
BAC19364.1
Hypothetical protein; CE2554.
       0.617
gene:10743002
Uncharacterized protein.
       0.617
BAC19366.1
Hypothetical protein; CE2556.
       0.445
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.