STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10742998DUF4178 domain-containing protein. (253 aa)    
Predicted Functional Partners:
BAC19360.1
Hypothetical protein; CE2550.
 
    0.962
BAC19358.1
Conserved hypothetical protein; CE2548, similar to AL646084-18|CAD18448.1| percent identity: 28 in 141 aa.
 
     0.957
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.953
gene:10742996
Uncharacterized protein.
       0.840
BAC19362.1
Hypothetical protein; CE2552.
       0.773
BAC17618.1
Conserved hypothetical protein; CE0808, similar to AX065697-1|CAC26088.1| percent identity: 61 in 340 aa.
  
     0.683
gene:10740977
Uncharacterized protein.
  
     0.666
gene:10743000
annotation not available
       0.655
BAC19492.1
Conserved hypothetical protein; CE2682, similar to AL583926-32|CAC32114.1| percent identity: 32 in 442 aa.
  
     0.618
BAC19364.1
Hypothetical protein; CE2554.
       0.617
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.