STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:10743115PG_binding_4 domain-containing protein. (566 aa)    
Predicted Functional Partners:
BAC19478.1
Hypothetical protein; CE2668.
       0.671
gene:10743220
RNase_H_2 domain-containing protein.
  
     0.603
BAC18560.1
Hypothetical protein; CE1750.
  
     0.567
gene:10740523
Putative membrane protein.
  
     0.531
gene:10741896
Uncharacterized protein.
  
     0.513
BAC19480.1
Putative beta-N-acetylglucosaminidase; CE2670, similar to AL021929-1|CAA17329.1| percent identity: 42 in 383 aa.
     
 0.490
gene:10743117
Uncharacterized protein.
       0.489
gene:10742750
Uncharacterized protein.
  
   
 0.476
gene:10742101
Uncharacterized protein.
  
     0.472
gene:10741020
Uncharacterized protein.
  
     0.464
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.