STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC19509.1Conserved hypothetical protein; CE2699, similar to AL021928-11|CAA17326.1| percent identity: 33 in 353 aa. (386 aa)    
Predicted Functional Partners:
BAC19507.1
Conserved hypothetical protein; CE2697, similar to Z95398-19|CAB08814.1| percent identity: 47 in 219 aa.
 
   
 0.957
gene:10743146
Putative membrane protein.
 
   
 0.898
gene:10743148
Uncharacterized protein.
 
   
 0.890
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
     
 0.850
gene:10742420
Uncharacterized protein.
  
     0.769
BAC19521.1
Conserved hypothetical protein; CE2711, similar to AE007185-3|AAK48278.1| percent identity: 41 in 576 aa.
 
  
 0.768
gene:10743012
Uncharacterized protein.
  
     0.747
BAC19517.1
Conserved hypothetical protein; CE2707, similar to AE007184-7|AAK48275.1| percent identity: 39 in 297 aa.
  
   
 0.746
BAC17711.1
Hypothetical protein; CE0901.
  
     0.742
BAC18600.1
Conserved hypothetical protein; CE1790, similar to AL583922-58|CAC30455.1| percent identity: 22 in 390 aa.
  
     0.742
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.