STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC19583.1Conserved hypothetical protein; CE2773, similar to AE007188-17|AAK48332.1| percent identity: 38 in 208 aa. (212 aa)    
Predicted Functional Partners:
gene:10743220
RNase_H_2 domain-containing protein.
 
     0.897
BAC19208.1
Conserved hypothetical protein; CE2398, similar to U00014-2|AAA50903.1| percent identity: 42 in 94 aa.
  
    0.795
BAC17289.1
Conserved hypothetical protein; CE0479, similar to AL583925-4|CAC31787.1| percent identity: 36 in 138 aa.
  
     0.774
BAC17595.1
Conserved hypothetical protein; CE0785, similar to Z95120-10|CAB08304.1| percent identity: 28 in 397 aa.
  
     0.774
BAC17599.1
Conserved hypothetical protein; CE0789, similar to AX065623-1|CAC26051.1| percent identity: 74 in 254 aa.
  
     0.774
gene:10743045
Uncharacterized protein.
  
     0.774
gene:10743174
Septum_form domain-containing protein.
  
     0.774
gene:10741770
Uncharacterized protein.
  
     0.773
BAC18243.1
Hypothetical protein; CE1433.
  
     0.773
BAC17402.1
Conserved hypothetical protein; CE0592, similar to AL583918-51|CAC29878.1| percent identity: 44 in 254 aa.
  
     0.772
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.