STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAC19635.1Conserved hypothetical protein; CE2825, similar to AL583926-97|CAC32221.1| percent identity: 36 in 112 aa. (150 aa)    
Predicted Functional Partners:
BAC19637.1
Conserved hypothetical protein; CE2827, similar to AE007079-10|AAK46675.1| percent identity: 28 in 292 aa.
     
 0.935
gene:10743272
Uncharacterized protein.
     
 0.880
BAC19633.1
Putative membrane protein; CE2823, similar to AF187306-1|AAF25828.1| percent identity: 41 in 507 aa.
 
     0.806
gene:10743276
Putative transcription regulator.
     
 0.778
BAC18152.1
Conserved hypothetical protein; CE1342, similar to AL021287-27|CAA16098.1| percent identity: 42 in 218 aa.
  
     0.754
gene:10743274
Putative penicillin-binding protein.
     
 0.748
BAC19621.1
Conserved hypothetical protein; CE2811, similar to AC005893-12|AAF31041.1| percent identity: 25 in 271 aa.
  
     0.740
gene:10742282
Uncharacterized protein.
  
     0.722
gene:10742711
Uncharacterized protein.
  
     0.684
BAC18522.1
Conserved hypothetical protein; CE1712, similar to AX064285-1|CAC25383.1| percent identity: 73 in 196 aa.
  
     0.659
Your Current Organism:
Corynebacterium efficiens
NCBI taxonomy Id: 196164
Other names: C. efficiens YS-314, Corynebacterium efficiens DSM 44549, Corynebacterium efficiens JCM 11189, Corynebacterium efficiens YS-314, Corynebacterium efficiens str. YS-314, Corynebacterium efficiens strain YS-314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.